STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012110Coiled-coil domain-containing protein 89-like. (315 aa)    
Predicted Functional Partners:
LOC107554070
ESCRT-II complex subunit VPS22.
      
 0.657
LOC107584075
Vacuolar-sorting protein SNF8-like.
      
 0.657
LOC107554840
F-box only protein 38-like isoform X1.
      
 0.654
LOC107593195
F-box only protein 38-like.
      
 0.654
LOC107585603
Amyloid protein-binding protein 2-like.
      
 0.642
appbp2
Amyloid protein-binding protein 2.
      
 0.642
LOC107600922
DDB1- and CUL4-associated factor 12-like.
      
 0.621
LOC107584538
DDB1- and CUL4-associated factor 12.
      
 0.621
LOC107595115
Kelch-like protein 15 isoform X1.
      
 0.609
LOC107549194
Kelch-like protein 15 isoform X1.
      
 0.609
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.