Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012113Telomerase protein component 1-like. (702 aa)    
Predicted Functional Partners:
ENSSGRP00000041033
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.948
leo1
RNA polymerase-associated protein LEO1.
    
 0.948
ENSSGRP00000014391
annotation not available
   
 0.898
LOC107584771
Cytochrome c.
   
 0.898
LOC107581377
Cytochrome c-like.
   
 0.898
ENSSGRP00000041925
Damage-specific DNA binding protein 1.
    
 0.886
ENSSGRP00000096558
Parafibromin-like.
    
 0.886
LOC107593758
Parafibromin.
    
 0.886
ENSSGRP00000023512
Helicase SKI2W-like.
   
 0.872
LOC107581957
Transcription initiation factor TFIID subunit 9-like.
   
 0.862
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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