Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107573972AP-1 complex subunit mu-2-like. (237 aa)    
Predicted Functional Partners:
LOC107558053
AP-1 complex subunit gamma-1-like isoform X1.
   
 0.972
ENSSGRP00000084884
annotation not available
   
 0.972
Ap1g1
AP-1 complex subunit gamma-1.
   
 0.963
ENSSGRP00000051335
AP-1 complex subunit gamma-1-like.
   
 0.963
ENSSGRP00000053697
AP-1 complex subunit beta-1.
   
 0.963
LOC107592369
AP-1 complex subunit beta-1-like.
   
 0.963
LOC107562082
AP-1 complex subunit sigma-2-like.
   
 0.937
LOC107602789
AP-1 complex subunit sigma-2-like.
   
 0.937
LOC107593725
AP-1 complex subunit sigma-1A-like.
   
 0.927
LOC107561813
AP-1 complex subunit sigma-1A isoform X1.
   
 0.927
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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