STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012117Collagen, type XXVIII, alpha 2a. (872 aa)    
Predicted Functional Partners:
LOC107587590
Myosin-binding protein H-like isoform X1.
    
 0.578
ENSSGRP00000031174
Uncharacterized family 31 glucosidase KIAA1161-like.
   
 0.515
LOC107584535
Uncharacterized family 31 glucosidase KIAA1161-like.
   
 0.515
ENSSGRP00000002218
Myosin binding protein Ha.
      
 0.502
ENSSGRP00000098057
Myosin binding protein Ha.
      
 0.502
ENSSGRP00000034836
RING finger protein 223-like.
   
 0.471
LOC107565477
Protein disulfide-isomerase-like.
   
 0.456
ENSSGRP00000041451
Protein disulfide-isomerase A2-like.
   
 0.456
ENSSGRP00000011528
WD repeat domain 90.
   
 0.454
ENSSGRP00000011618
AT-rich interactive domain-containing protein 4A-like.
    
 0.451
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.