Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012120Apolipoprotein L, 1. (318 aa)    
Predicted Functional Partners:
ENSSGRP00000032432
annotation not available
    
  0.669
Fancm
Fanconi anemia group M protein.
    
  0.669
ENSSGRP00000046515
Phospholipid transfer protein-like.
     
 0.538
LOC107560511
Phospholipid transfer protein-like.
     
 0.538
ENSSGRP00000036272
Fatty acid-binding protein 10-A, liver basic-like.
      
 0.536
ENSSGRP00000036302
Beta,beta-carotene 15,15'-dioxygenase-like.
      
 0.536
LOC107601978
Fatty acid-binding protein 10-A, liver basic.
      
 0.536
LOC107581318
Myosin-9-like.
      
 0.536
LOC107551920
Myosin heavy chain 9/10/11/14.
      
 0.536
H6pd
LOW QUALITY PROTEIN: GDH/6PGL endoplasmic bifunctional protein.
   
 
 0.528
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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