Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
strbpSpermatid perinuclear RNA-binding protein isoform X1. (696 aa)    
Predicted Functional Partners:
ENSSGRP00000066771
Interleukin enhancer-binding factor 3 homolog.
   
   0.954
ENSSGRP00000079147
Interleukin enhancer-binding factor 3 homolog isoform X1.
   
   0.954
ENSSGRP00000009058
Interleukin enhancer-binding factor 2 homolog.
   
 0.942
ilf2
Interleukin enhancer-binding factor 2.
   
 0.942
LOC107591208
Spermatogenesis-associated protein 13-like isoform X1.
      
 0.767
LOC107560808
Interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1.
    
 
 0.740
LOC107561017
RISC-loading complex subunit tarbp2-like isoform X1.
    
 
 0.740
LOC107549310
RISC-loading complex subunit TARBP2.
    
 
 0.740
LOC107561731
Interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog.
    
 
 0.740
LOC107560262
Double-stranded RNA-binding protein Staufen homolog 2.
   
 
 0.722
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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