Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107557836Heterogeneous nuclear ribonucleoprotein C-like isoform X1. (303 aa)    
Predicted Functional Partners:
Rbmx
Heterogeneous nuclear ribonucleoprotein G.
   
 0.977
LOC107560625
RNA-binding motif protein, X chromosome-like.
   
 0.977
LOC107599446
Heterogeneous nuclear ribonucleoprotein M-like isoform X1.
   
 0.972
ENSSGRP00000108454
Heterogeneous nuclear ribonucleoprotein M.
   
 0.972
eif4a3
Eukaryotic initiation factor 4A-III.
   
 0.960
ENSSGRP00000015435
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.946
ENSSGRP00000042792
Heterogeneous nuclear ribonucleoprotein K-like isoform X1.
   
 0.946
ENSSGRP00000042814
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.946
ENSSGRP00000070031
Heterogeneous nuclear ribonucleoprotein K.
   
 0.946
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.946
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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