Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSGRP00000012160Chondroitin sulfate proteoglycan 5a. (480 aa)    
Predicted Functional Partners:
ENSSGRP00000046039
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
     
  0.766
smarcc2
SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C.
     
  0.766
ENSSGRP00000014067
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a.
     
  0.619
ENSSGRP00000014230
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
     
  0.619
LOC107600486
SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C.
     
  0.619
ENSSGRP00000101305
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
     
  0.619
LOC107568188
Enolase-like.
      
 0.567
ENSSGRP00000108782
Uncharacterized protein LOC107602257.
      
 0.553
ENSSGRP00000090172
Protein tyrosine phosphatase receptor type Nb.
      
 0.510
LOC107602386
Tyrosine-protein phosphatase non-receptor type 23-like isoform X1.
      
 0.484
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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