STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012345Protein SLX4IP-like. (335 aa)    
Predicted Functional Partners:
ENSSGRP00000073714
annotation not available
    
 
 0.806
ENSSGRP00000112113
Structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12).
    
 
 0.806
ENSSGRP00000090966
Family with sequence similarity 113.
      
 0.652
NARS1
Asparagine--tRNA ligase, cytoplasmic.
    
 
 0.638
ENSSGRP00000032641
SLX1 homolog B, structure-specific endonuclease subunit.
    
 
 0.630
ENSSGRP00000002981
MUS81 structure-specific endonuclease subunit.
    
 
 0.625
rad54l2
RAD54-like protein 2.
      
 0.625
ENSSGRP00000077301
RAD54-like protein 2.
      
 0.625
ENSSGRP00000092762
MUS81 structure-specific endonuclease subunit.
    
 
 0.625
ENSSGRP00000001859
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
      
 0.604
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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