STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpep1Membrane dipeptidase. (397 aa)    
Predicted Functional Partners:
ttc36
Tetratricopeptide repeat protein 36.
   
  
 0.547
rpe
Ribulose-phosphate 3-epimerase.
     
 0.542
ENSSGRP00000069562
Ribulose-phosphate 3-epimerase-like.
     
 0.542
ENSSGRP00000032345
Cytosolic non-specific dipeptidase-like.
  
  
 0.531
GGT7
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
  
 0.515
ENSSGRP00000109246
annotation not available
  
  
 0.515
Aasdh
Acyl-CoA synthetase family member 4 isoform X1.
  
  
 0.514
LOC107556657
Cytochrome c oxidase subunit 6B1-like.
      
 0.489
ENSSGRP00000040506
Cytochrome c oxidase subunit 6B1.
      
 0.489
LOC107561113
Cytochrome c oxidase subunit 6B1-like.
      
 0.489
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.