STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000016006Hydroxymethylbilane synthase a. (338 aa)    
Predicted Functional Partners:
LOC107596028
Delta-aminolevulinic acid dehydratase-like.
 
 0.987
LOC107559740
Delta-aminolevulinic acid dehydratase-like.
 
 0.987
ENSSGRP00000010164
Uroporphyrinogen-III synthase-like.
  
 0.982
Uros
Uroporphyrinogen-III synthase.
  
 0.982
urod
Uroporphyrinogen decarboxylase isoform X1.
 
 0.918
ENDOV
Endonuclease V isoform X1.
  
 0.866
ENSSGRP00000020439
Spermatogenesis associated 20.
    
  0.762
spata20
Spermatogenesis-associated protein 20 isoform X1.
    
  0.762
fech
Protoporphyrin/coproporphyrin ferrochelatase.
  
  
 0.757
LOC107569008
Bifunctional glutamate/proline--tRNA ligase-like.
  
  
 0.668
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.