STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587350ATP-binding cassette, subfamily G (WHITE), member 4. (644 aa)    
Predicted Functional Partners:
ENSSGRP00000076972
ATP-binding cassette, subfamily G (WHITE), member 4.
  
  
 
0.900
abcg5
ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).
   
0.824
ENSSGRP00000046366
ATP-binding cassette sub-family G member 5-like.
   
0.824
ENSSGRP00000027120
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.531
LOC107599357
F-type H+-transporting ATPase subunit alpha.
    
 
 0.525
LOC107585631
ATP synthase subunit alpha, mitochondrial-like.
    
 
 0.525
abcf3
ATP-binding cassette, subfamily F, member 3.
      
 0.513
LOC107555824
ATP synthase subunit gamma, mitochondrial.
   
   0.513
ENSSGRP00000111279
ATP synthase subunit gamma, mitochondrial-like isoform X1.
   
   0.513
LOC107549120
Kinesin-like protein KIF25 isoform X1.
   
  
 0.507
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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