STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000018992VPS10 domain-containing receptor SorCS1-like. (1175 aa)    
Predicted Functional Partners:
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
     
 0.928
gak
Cyclin-G-associated kinase isoform X1.
     
 0.928
ENSSGRP00000079901
Cyclin G associated kinase.
     
 0.928
LOC107586353
ADP-ribosylation factor-binding protein GGA1-like.
    
 
 0.628
ENSSGRP00000101877
ADP-ribosylation factor-binding protein GGA1-like.
    
 
 0.628
LOC107598694
Vacuolar protein sorting-associated protein 35-like.
    
 
 0.603
LOC107591026
Vacuolar protein sorting-associated protein 35.
    
 
 0.603
ENSSGRP00000064762
Cation-independent mannose-6-phosphate receptor-like.
    
 0.580
LOC107603065
Cation-independent mannose-6-phosphate receptor-like.
    
 0.580
ENSSGRP00000056488
annotation not available
    
 
 0.538
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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