STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000019322annotation not available (326 aa)    
Predicted Functional Partners:
ENSSGRP00000032432
annotation not available
    
 0.831
Fancm
Fanconi anemia group M protein.
    
 0.831
LOC107584584
Centromere protein T-like isoform X1.
    
 0.597
LOC107561548
Protein lin-52 homolog.
    
 0.521
LOC107594798
Protein lin-52 homolog.
    
 0.521
LOC107562955
Replication protein A 70 kDa DNA-binding subunit isoform X1.
    
 0.489
LOC107548543
Replication protein A 70 kDa DNA-binding subunit-like.
    
 0.489
lin9
Protein lin-9 homolog.
    
 0.484
ENSSGRP00000078574
Lin-9 DREAM MuvB core complex component.
    
 0.484
ENSSGRP00000020964
Protein lin-54 homolog.
    
 0.455
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.