STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nit1Deaminated glutathione amidase. (287 aa)    
Predicted Functional Partners:
LOC107599808
DNA polymerase alpha subunit B-like.
      
 0.645
ENSSGRP00000020424
Polymerase (DNA directed), alpha 2.
      
 0.645
LOC107549751
Uncharacterized protein C3orf38 homolog.
      
 0.641
ENSSGRP00000111463
Chromosome 3 open reading frame 38.
      
 0.641
LOC107584789
Probable 8-oxo-dGTP diphosphatase NUDT15 isoform X1.
    
 0.640
LOC107581358
Probable 8-oxo-dGTP diphosphatase NUDT15.
    
 0.640
LOC107570652
Spermidine synthase-like isoform X1.
  
 
 0.635
tdp2
Tyrosyl-DNA phosphodiesterase 2.
      
 0.635
LOC107555562
Tyrosyl-DNA phosphodiesterase 2-like.
      
 0.635
ENSSGRP00000071341
Spermine synthase-like.
  
 
 0.635
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.