STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000024459annotation not available (245 aa)    
Predicted Functional Partners:
c8b
Complement component 8 subunit beta.
   
 0.771
ENSSGRP00000096558
Parafibromin-like.
   
 0.762
LOC107593758
Parafibromin.
   
 0.762
ENSSGRP00000000939
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.713
ENSSGRP00000032271
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.713
ENSSGRP00000025310
RNA polymerase-associated protein CTR9 homolog.
    
 0.665
LOC107561545
Cyclin-dependent kinase 2-interacting protein-like isoform X1.
    
 0.665
LOC107553014
RNA polymerase-associated protein CTR9 homolog.
    
 0.665
ENSSGRP00000086581
annotation not available
    
 0.665
ENSSGRP00000086583
Cyclin-dependent kinase 2 interacting protein.
    
 0.665
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.