STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000025605annotation not available (1356 aa)    
Predicted Functional Partners:
ENSSGRP00000030473
Polyubiquitin-C isoform X1.
    
 0.782
ENSSGRP00000089091
Polyubiquitin-B-like isoform X1.
    
 0.782
ENSSGRP00000083272
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.752
ENSSGRP00000106616
annotation not available
    
 0.752
LOC107567735
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.694
ENSSGRP00000004833
annotation not available
    
 0.694
LOC107567735-2
ubiquitin-40S ribosomal protein S27a.
    
 0.694
smad6
Mothers against decapentaplegic homolog 6.
    
 0.638
LOC107583766
Mothers against decapentaplegic homolog 6-like.
    
 0.638
Smad7
Mothers against decapentaplegic homolog 7.
    
 0.638
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.