STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107574289Anoctamin-5-like isoform X1. (764 aa)    
Predicted Functional Partners:
ENSSGRP00000074007
Sorbin and SH3 domain-containing protein 2-like.
     
 0.498
ENSSGRP00000100178
Sorbin and SH3 domain containing 2b.
     
 0.498
ENSSGRP00000100179
annotation not available
     
 0.498
LOC107592673
Fukutin-related protein-like.
   
 
 0.456
LOC107566082
Fukutin-related protein-like.
   
 
 0.456
LOC107549093
KATNB1-like protein 1 isoform X1.
      
 0.443
LOC107601956
KATNB1-like protein 1 isoform X1.
      
 0.443
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.