STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000031541Glycine dehydrogenase (decarboxylating). (861 aa)    
Predicted Functional Partners:
ENSSGRP00000009494
Aminomethyltransferase.
 
 0.996
Amt
Aminomethyltransferase, mitochondrial.
 
 0.996
LOC107584745
Glycine cleavage system H protein, mitochondrial-like.
 
 0.993
ENSSGRP00000052543
Glycine cleavage system H protein, mitochondrial-like.
 
 0.993
LOC107600162
Glycine cleavage system H protein, mitochondrial-like.
 
 0.993
LOC107564915
Glycine cleavage system H protein, mitochondrial-like.
 
 0.993
Gart
Trifunctional purine biosynthetic protein adenosine-3.
  
  
 0.987
ENSSGRP00000017862
Serine hydroxymethyltransferase 2 (mitochondrial).
  
 
 0.975
LOC107581728
Serine hydroxymethyltransferase, cytosolic-like.
  
 
 0.975
ENSSGRP00000053716
Serine hydroxymethyltransferase, mitochondrial-like.
  
 
 0.975
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.