STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107574388Tripeptidyl-peptidase 2-like. (217 aa)    
Predicted Functional Partners:
ENSSGRP00000034618
Autophagy-related protein 5.
      
 0.629
Atg5
Autophagy-related protein 5.
      
 0.629
LOC107566902
V-type H+-transporting ATPase subunit G.
      
 0.628
LOC107589715
Bleomycin hydrolase-like.
   
 
 0.626
LOC107548589
Bleomycin hydrolase-like.
   
 
 0.626
pex7
Peroxisomal biogenesis factor 7.
      
 0.603
fastkd3
FAST kinase domains 3.
     
 0.584
ENSSGRP00000095889
Peptidase D.
     
 0.584
ENSSGRP00000007477
Relaxin family peptide receptor 2.
   
 0.540
LOC107578685
Relaxin receptor 2-like.
   
 0.540
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.