STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000034240BMS1 ribosome biogenesis factor. (1122 aa)    
Predicted Functional Partners:
ENSSGRP00000013069
UTP3 small subunit processome component.
   
 
 0.999
ENSSGRP00000015598
WD repeat domain 36.
   
 
 0.999
Pdcd11
RRNA biogenesis protein RRP5.
   
 
 0.999
LOC107583586
U3 small nucleolar RNA-associated protein 5.
   
 0.999
ENSSGRP00000028008
NOP14 nucleolar protein homolog (yeast).
   
 
 0.999
NOP14
Nucleolar protein 14.
   
 
 0.999
utp18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.999
ENSSGRP00000041844
Protein AATF-like isoform X1.
   
 
 0.999
ENSSGRP00000042739
U3 small nucleolar RNA-associated protein 21.
   
 
 0.999
caprin1
RNA cytidine acetyltransferase-like.
   
 
 0.999
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.