STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107556455Vascular endothelial growth factor D-like. (271 aa)    
Predicted Functional Partners:
LOC107550773
Vascular endothelial growth factor receptor kdr-like.
    
 0.947
LOC107558038
Vascular endothelial growth factor receptor 3-like.
    
 0.945
ENSSGRP00000113017
Vascular endothelial growth factor receptor 3-like.
    
 0.945
kdr
Vascular endothelial growth factor receptor 2.
    
 0.944
LOC107591220
Vascular endothelial growth factor receptor 1-like.
    
 0.926
ENSSGRP00000092919
Vascular endothelial growth factor receptor 1-like.
    
 0.926
ENSSGRP00000012853
Kinase insert domain receptor (a type III receptor tyrosine kinase).
    
 0.848
ENSSGRP00000027786
Platelet-derived growth factor receptor alpha-like.
    
 0.841
ENSSGRP00000040476
LOW QUALITY PROTEIN: platelet-derived growth factor receptor beta-like.
    
 0.841
ENSSGRP00000075071
Platelet-derived growth factor receptor alpha.
    
 0.841
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.