STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000036120annotation not available (545 aa)    
Predicted Functional Partners:
ENSSGRP00000102561
Rubicon like autophagy enhancer.
   
    0.809
ENSSGRP00000025214
annotation not available
   
    0.792
LOC107572154
Pre-mRNA-splicing factor CWC25 homolog isoform X1.
   
    0.708
LOC107592951
Uncharacterized protein C1orf109 homolog.
   
    0.708
LOC107562839
Pre-mRNA-splicing factor CWC25 homolog.
   
    0.708
LOC107591985
Uncharacterized protein C1orf109 homolog.
   
    0.708
Aasdh
Acyl-CoA synthetase family member 4 isoform X1.
   
  
 0.630
acot13
Acyl-coenzyme A thioesterase 13.
     
 0.617
LOC107596683
Acyl-coenzyme A thioesterase THEM4-like.
     
 0.602
LOC107591736
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X1.
   
    0.588
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.