STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107598625Transmembrane emp24 domain-containing protein 4-like. (222 aa)    
Predicted Functional Partners:
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
0.994
LOC107550417
Transmembrane emp24 domain-containing protein 10-like.
   
0.986
LOC107593259
Transmembrane protein Tmp21-like.
   
0.986
ENSSGRP00000005275
annotation not available
   
0.869
LOC107573769
Transmembrane emp24 domain-containing protein 7-like.
   
0.869
ENSSGRP00000040866
annotation not available
   
0.869
ENSSGRP00000061167
annotation not available
   
 0.869
LOC107585977
Transmembrane emp24 domain-containing protein 3-like.
   
0.869
ENSSGRP00000008111
ER-derived vesicles protein.
   
 0.864
ENSSGRP00000017476
Surfeit locus protein 4-like.
   
 0.864
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.