STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (148 aa)    
Predicted Functional Partners:
ENSSGRP00000036711
Conserved oligomeric Golgi complex subunit 6-like.
      
 0.493
cog6
Conserved oligomeric Golgi complex subunit 6 isoform X1.
      
 0.493
ENSSGRP00000090835
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
   
  
 0.490
LOC107587232
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X1.
   
  
 0.490
LOC107588215
5-hydroxytryptamine receptor 2C-like.
      
 0.446
LOC107562757
5-hydroxytryptamine receptor 2C-like isoform X1.
      
 0.446
LOC107599943
28S ribosomal protein S31, mitochondrial-like.
      
 0.434
ENSSGRP00000074189
Mitochondrial ribosomal protein S31.
      
 0.434
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.