STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107596655Oxysterol-binding protein-related protein 3-like isoform X1. (863 aa)    
Predicted Functional Partners:
ENSSGRP00000006572
Vesicle-associated membrane protein-associated protein A-like.
    
 0.665
vapb
VAMP associated protein B and C.
    
 0.665
ENSSGRP00000078838
Vesicle-associated membrane protein-associated protein A-like.
    
 0.665
LOC107549812
Vesicle-associated membrane protein-associated protein A-like.
    
 0.665
ENSSGRP00000088685
Vesicle-associated membrane protein-associated protein B-like.
    
 0.665
LOC107601124
Motile sperm domain-containing protein 1-like.
    
 0.623
LOC107560686
Motile sperm domain-containing protein 1-like.
    
 0.623
ENSSGRP00000033857
BAH and coiled-coil domain-containing protein 1-like isoform X1.
    
 0.518
LOC107596305
Aspartyl aminopeptidase-like isoform X1.
      
 0.491
Agbl5
LOW QUALITY PROTEIN: cytosolic carboxypeptidase-like protein 5.
      
 0.487
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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