STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107570182Tripartite motif-containing protein 44-like. (321 aa)    
Predicted Functional Partners:
ift52
Intraflagellar transport protein 52 homolog.
    
 0.638
ENSSGRP00000103568
S-phase cyclin A-associated protein in the ER.
      
 0.637
LOC107583609
Isoleucine--tRNA ligase, mitochondrial-like.
    
 
 0.634
LOC107582886
Isoleucine--tRNA ligase, mitochondrial-like.
    
 
 0.634
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.631
ENSSGRP00000038399
Tripartite motif containing 66.
    
 0.612
ENSSGRP00000058842
Tripartite motif-containing protein 66-like isoform X1.
    
 0.612
LOC107566989
Intraflagellar transport protein 57 homolog.
    
 0.606
LOC107602615
Intraflagellar transport protein 57 homolog.
    
 0.606
ENSSGRP00000005445
Intraflagellar transport protein 80 homolog.
    
 0.605
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.