STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107557686Macrophage erythroblast attacher-like. (430 aa)    
Predicted Functional Partners:
LOC107598169
Armadillo repeat-containing protein 8.
    
 
 0.823
ENSSGRP00000112485
Armadillo repeat containing 8.
    
 
 0.823
LOC107549514
Glucose-induced degradation protein 8 homolog.
  
 
 
 0.744
LOC107560896
Glucose-induced degradation protein 8 homolog.
  
 
 
 0.742
LOC107560896-2
Glucose-induced degradation protein 8 homolog.
  
 
 
 0.742
LOC107549954
Glucose-induced degradation protein 8 homolog.
  
 
 
 0.741
LOC107583731
Ran-binding protein 9/10.
    
 
 0.723
LOC107556766
Ran-binding protein 9/10.
    
 
 0.723
ENSSGRP00000066720
RAN binding protein 9.
    
 
 0.723
RANBP10
Ran-binding protein 10-like.
    
 
 0.723
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.