STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587943Heme-binding protein 2-like. (216 aa)    
Predicted Functional Partners:
ENSSGRP00000005650
Bcl-2-like 1 (apoptosis regulator Bcl-X).
   
 
 0.725
LOC107560925
Bcl-2-like 1 (apoptosis regulator Bcl-X).
   
 
 0.725
Pdcd6
Programmed cell death protein 6.
    
   0.585
ENSSGRP00000040188
Peflin-like.
    
   0.585
ENSSGRP00000072291
penta-EF-hand domain containing 1.
    
   0.585
ENSSGRP00000110176
Programmed cell death 6.
    
   0.585
LOC107601130
Hemagglutinin/amebocyte aggregation factor-like.
      
 0.491
LOC107583991
Hemagglutinin/amebocyte aggregation factor-like.
      
 0.491
LOC107567242
Procollagen galactosyltransferase 1-like.
      
 0.446
LOC107572560
Cat eye syndrome critical region protein 2-like isoform X1.
      
 0.443
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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