STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107559277DnaJ homolog subfamily C member 4-like isoform X1. (236 aa)    
Predicted Functional Partners:
ENSSGRP00000054041
LOW QUALITY PROTEIN: cell division cycle 5-like protein.
    
 
 0.666
ENSSGRP00000112821
Cell division cycle 5-like protein.
    
 
 0.666
ENSSGRP00000040417
DnaJ homolog subfamily C member 11-like.
    
 
 0.529
LOC107586512
DnaJ homolog subfamily C member 11.
    
 
 0.529
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
    
 
 0.502
gak
Cyclin-G-associated kinase isoform X1.
    
 
 0.502
ENSSGRP00000079901
Cyclin G associated kinase.
    
 
 0.502
ENSSGRP00000055489
DnaJ homolog subfamily B member 14-like.
    
 
 0.495
ENSSGRP00000072358
Exportin-4-like.
      
 0.495
ENSSGRP00000101225
Exportin-4.
      
 0.495
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.