LOC107564711 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC107564711

MAP kinase-interacting serine/threonine-protein kinase 2-like. (477 aa)

Predicted Functional Partners:

LOC107590568

0.800

LOC107599134

0.800

LOC107599610

0.800

LOC107567791

0.800

LOC107589564

0.756

ENSSGRP00000026285

0.756

LOC107585229

0.756

LOC107570449

0.756

LOC107582514

0.756

LOC107556921

0.756

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000026285	LOC107564711	ENSSGRP00000026285	ENSSGRP00000041290	Eukaryotic translation initiation factor 4E-1B.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.756
LOC107556921	LOC107564711	ENSSGRP00000097082	ENSSGRP00000041290	Eukaryotic translation initiation factor 4E-1A-like isoform X1.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.756
LOC107564711	ENSSGRP00000026285	ENSSGRP00000041290	ENSSGRP00000026285	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Eukaryotic translation initiation factor 4E-1B.	0.756
LOC107564711	LOC107556921	ENSSGRP00000041290	ENSSGRP00000097082	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Eukaryotic translation initiation factor 4E-1A-like isoform X1.	0.756
LOC107564711	LOC107567791	ENSSGRP00000041290	ENSSGRP00000093365	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Mitogen-activated protein kinase 1-like.	0.800
LOC107564711	LOC107570449	ENSSGRP00000041290	ENSSGRP00000080178	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Eukaryotic translation initiation factor 4E-1A-like.	0.756
LOC107564711	LOC107582514	ENSSGRP00000041290	ENSSGRP00000096203	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Eukaryotic translation initiation factor 4E-like isoform X1.	0.756
LOC107564711	LOC107585229	ENSSGRP00000041290	ENSSGRP00000038332	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Eukaryotic translation initiation factor 4E-1A-like isoform X1.	0.756
LOC107564711	LOC107589564	ENSSGRP00000041290	ENSSGRP00000019404	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Eukaryotic translation initiation factor 4E-like.	0.756
LOC107564711	LOC107590568	ENSSGRP00000041290	ENSSGRP00000014309	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Mitogen-activated protein kinase 1-like.	0.800
LOC107564711	LOC107599134	ENSSGRP00000041290	ENSSGRP00000074851	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Mitogen-activated protein kinase 1-like.	0.800
LOC107564711	LOC107599610	ENSSGRP00000041290	ENSSGRP00000087334	MAP kinase-interacting serine/threonine-protein kinase 2-like.	Mitogen-activated protein kinase 1/3.	0.800
LOC107567791	LOC107564711	ENSSGRP00000093365	ENSSGRP00000041290	Mitogen-activated protein kinase 1-like.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.800
LOC107567791	LOC107599134	ENSSGRP00000093365	ENSSGRP00000074851	Mitogen-activated protein kinase 1-like.	Mitogen-activated protein kinase 1-like.	0.502
LOC107567791	LOC107599610	ENSSGRP00000093365	ENSSGRP00000087334	Mitogen-activated protein kinase 1-like.	Mitogen-activated protein kinase 1/3.	0.502
LOC107570449	LOC107564711	ENSSGRP00000080178	ENSSGRP00000041290	Eukaryotic translation initiation factor 4E-1A-like.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.756
LOC107582514	LOC107564711	ENSSGRP00000096203	ENSSGRP00000041290	Eukaryotic translation initiation factor 4E-like isoform X1.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.756
LOC107585229	LOC107564711	ENSSGRP00000038332	ENSSGRP00000041290	Eukaryotic translation initiation factor 4E-1A-like isoform X1.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.756
LOC107589564	LOC107564711	ENSSGRP00000019404	ENSSGRP00000041290	Eukaryotic translation initiation factor 4E-like.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.756
LOC107590568	LOC107564711	ENSSGRP00000014309	ENSSGRP00000041290	Mitogen-activated protein kinase 1-like.	MAP kinase-interacting serine/threonine-protein kinase 2-like.	0.800