STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107582510Protein quaking-A-like isoform X1. (383 aa)    
Predicted Functional Partners:
med1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
   
   0.838
ENSSGRP00000033491
RNA binding protein, mRNA processing factor.
    
 
 0.750
ENSSGRP00000055091
Mediator of RNA polymerase II transcription subunit 15-like.
   
   0.731
ENSSGRP00000088257
Mediator of RNA polymerase II transcription subunit 15-like.
   
   0.731
LOC107601074
Mediator of RNA polymerase II transcription subunit 4-like.
   
   0.728
med4
Mediator of RNA polymerase II transcription subunit 4.
   
   0.728
ENSSGRP00000058424
Mediator complex subunit 24.
   
   0.726
ENSSGRP00000091956
Mediator complex subunit 24.
   
   0.726
LOC107599285
Mediator of RNA polymerase II transcription subunit 31.
    
   0.724
ENSSGRP00000007461
Mediator of RNA polymerase II transcription subunit 23-like.
    
   0.724
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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