STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000042554Uncharacterized protein LOC107598455. (465 aa)    
Predicted Functional Partners:
ENSSGRP00000074274
Rano class II histocompatibility antigen, A beta chain-like.
  
 0.944
LOC107567999
H-2 class II histocompatibility antigen, E-S beta chain-like.
   
 0.927
LOC107564452
H-2 class II histocompatibility antigen, E-S beta chain-like.
   
 0.927
LOC107571812
H-2 class II histocompatibility antigen, E-S beta chain-like.
  
  
  0.919
LOC107574095
HLA class II histocompatibility antigen, DP alpha 1 chain-like.
   
 
 0.910
ENSSGRP00000004941
Pro-interleukin-16-like.
    
  0.903
LOC107571813
H-2 class II histocompatibility antigen, A-U alpha chain-like.
     
  0.903
ENSSGRP00000059495
Pro-interleukin-16-like.
    
  0.903
LOC107564453
Mamu class II histocompatibility antigen, DR alpha chain-like.
     
  0.903
LOC107564454
HLA class II histocompatibility antigen, DP alpha 1 chain-like.
     
  0.903
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.