STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sap130Histone deacetylase complex subunit SAP130. (1050 aa)    
Predicted Functional Partners:
ENSSGRP00000087320
AT-rich interactive domain-containing protein 4B-like.
    
 0.884
ENSSGRP00000079712
annotation not available
    
 0.813
SAP30L
Histone deacetylase complex subunit SAP30L-like.
    
 0.813
ENSSGRP00000011608
Protein FAM60A-like.
    
 
 0.733
LOC107586002
Protein FAM60A-like.
    
 
 0.733
ENSSGRP00000039351
Sin3 histone deacetylase corepressor complex component SDS3-like isoform X1.
   
 0.691
Suds3
Sin3 histone deacetylase corepressor complex component SDS3 isoform X1.
   
 0.691
ENSSGRP00000027510
Protein FAM60A-like.
    
 
 0.679
LOC107562797
Protein FAM60A-like.
    
 
 0.679
LOC107579959
Inhibitor of growth protein 2-like.
    
 
 0.672
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.