STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107598846Homeobox protein Hox-C11a. (309 aa)    
Predicted Functional Partners:
HOXC10
Homeobox protein Hox-C10a-like.
   
  
0.419
ENSSGRP00000036877
Homeobox protein Hox-A10b-like.
   
  
0.419
HOXC10-2
Homeobox protein Hox-C10a-like.
   
  
0.419
LOC107550811
Homeobox protein Hox-A10b isoform X1.
   
  
0.419
LOC107551120
Forkhead box protein J3-like.
    
 
 0.406
ENSSGRP00000108090
Forkhead box J3.
    
 
 0.406
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.