STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snx14Sorting nexin-14. (952 aa)    
Predicted Functional Partners:
ENSSGRP00000012900
Sorting nexin-13-like isoform X1.
   
 
0.724
ENSSGRP00000051571
Sorting nexin-13-like isoform X1.
   
 
0.724
ENSSGRP00000004400
Synergin, gamma.
      
 0.606
ENSSGRP00000028089
Synergin gamma-like isoform X1.
      
 0.606
LOC107589137
Sorting nexin-25-like.
   
 
0.604
LOC107556844
Sorting nexin-25-like.
   
 
0.604
ENSSGRP00000064987
BLM RecQ like helicase.
      
 0.523
ENSSGRP00000089578
BLM RecQ like helicase.
      
 0.523
ENSSGRP00000039290
F-box and leucine-rich repeat protein 5.
   
  
 0.520
ENSSGRP00000061823
F-box and leucine-rich repeat protein 5.
   
  
 0.520
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.