STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10756578639S ribosomal protein L43, mitochondrial-like. (148 aa)    
Predicted Functional Partners:
Mrps10
28S ribosomal protein S10, mitochondrial.
   
 
 0.998
mrps25
28S ribosomal protein S25, mitochondrial.
   
 
 0.997
mrpl16
39S ribosomal protein L16, mitochondrial isoform X1.
   
  0.993
LOC107599340
39S ribosomal protein L12, mitochondrial-like.
   
 
 0.992
MRPL49
39S ribosomal protein L49, mitochondrial.
   
 
 0.991
LOC107580894
39S ribosomal protein L49, mitochondrial-like.
   
 
 0.991
ENSSGRP00000006447
annotation not available
   
 
 0.990
mrps16
28S ribosomal protein S16, mitochondrial.
   
 
 0.990
Mrpl2
39S ribosomal protein L2, mitochondrial isoform X1.
   
 
 0.989
Mrpl21
39S ribosomal protein L21, mitochondrial.
   
 
 0.989
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.