STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587590Myosin-binding protein H-like isoform X1. (519 aa)    
Predicted Functional Partners:
LOC107597795
Histone H2A deubiquitinase MYSM1-like.
    
 0.870
ENSSGRP00000110057
Myb-like, SWIRM and MPN domains 1.
    
 0.870
ENSSGRP00000012934
Intersectin 2a.
     
 0.860
ENSSGRP00000074134
Intersectin-2-like.
     
 0.860
ENSSGRP00000084141
Intersectin 2b.
     
 0.860
LOC107594821
Intersectin-2-like isoform X1.
     
 0.860
LOC107558166
Dynactin subunit 2.
    
 0.742
ENSSGRP00000036700
Dynactin 2 (p50).
    
 0.742
DCTN6
Dynactin subunit 6.
    
 0.740
DCTN6-2
Dynactin subunit 6-like.
    
 0.740
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.