STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107598429Uncharacterized protein LOC107598429 isoform X1. (1879 aa)    
Predicted Functional Partners:
hmgcs1
Hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1.
  
 
 0.888
mvd
Diphosphomevalonate decarboxylase isoform X1.
  
 0.884
ggps1
Geranylgeranyl diphosphate synthase, type III.
    
 0.817
ENSSGRP00000042886
Lanosterol synthase-like.
  
 
 0.810
LOC107568024
Lanosterol 14-alpha demethylase.
  
  
 0.752
ENSSGRP00000006069
annotation not available
  
 0.724
fdft1
Farnesyl-diphosphate farnesyltransferase.
  
 0.724
ENSSGRP00000013239
annotation not available
  
 0.724
ENSSGRP00000052410
Squalene synthase-like.
  
 0.724
LOC107588045
Isopentenyl-diphosphate Delta-isomerase 1-like.
  
 
 0.680
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.