STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107551418HMG box-containing protein 1-like. (571 aa)    
Predicted Functional Partners:
ENSSGRP00000004214
Translation initiation factor IF-2, mitochondrial-like.
      
 0.627
ENSSGRP00000081244
Mitochondrial translational initiation factor 2.
      
 0.627
sin3b
Paired amphipathic helix protein Sin3b isoform X1.
   
 
 0.614
ENSSGRP00000006717
Paired amphipathic helix protein Sin3a-like.
   
 
 0.614
LOC107562523
Paired amphipathic helix protein Sin3a-like.
   
 
 0.614
ENSSGRP00000059989
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b-like.
   
 
 0.614
LOC107560009
Paired amphipathic helix protein Sin3a-like isoform X1.
   
 
 0.614
ENSSGRP00000088120
Paired amphipathic helix protein Sin3a-like.
   
 
 0.614
ENSSGRP00000102093
SIN3 transcription regulator family member Ab.
   
 
 0.614
LOC107599796
E3 ubiquitin-protein ligase RNF11.
      
 0.568
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (14%) [HD]