STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF821Zinc finger protein 821 isoform X1. (412 aa)    
Predicted Functional Partners:
trmt6
tRNA methyltransferase 6.
      
 0.639
Txnl4b
Thioredoxin-like protein 4B.
      
 0.633
LOC107589545
TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.
    
 
 0.613
LOC107582491
TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.
    
 
 0.613
LOC107561501
Ataxin-1-like.
    
 
 0.534
ENSSGRP00000037706
Ataxin 1-like.
    
 
 0.534
LOC107552998
Ataxin-1-like.
    
 
 0.534
ENSSGRP00000092090
Polycystic kidney disease 1 like 2a.
      
 0.510
ENSSGRP00000052429
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
    
 
 0.467
ENSSGRP00000052432
annotation not available
    
 
 0.467
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.