STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000047640Seizure related 6 homolog a. (805 aa)    
Predicted Functional Partners:
ENSSGRP00000087241
Polyamine-modulated factor 1-like.
    
 0.541
ENSSGRP00000011528
WD repeat domain 90.
    
 0.519
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
    
 0.494
gak
Cyclin-G-associated kinase isoform X1.
    
 0.494
ENSSGRP00000079901
Cyclin G associated kinase.
    
 0.494
srrd
SRR1-like protein.
      
 0.493
LOC107553458
Kinetochore-associated protein NSL1 homolog.
    
 0.491
LOC107558949
Kinetochore-associated protein NSL1 homolog.
    
 0.491
ENSSGRP00000064613
AP-2 complex subunit mu-like.
    
  0.486
ENSSGRP00000088719
AP-2 complex subunit mu-A-like isoform X1.
    
  0.486
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.