STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000053317Kit ligand b. (212 aa)    
Predicted Functional Partners:
ENSSGRP00000010930
Mast/stem cell growth factor receptor Kit-like.
      
 0.633
ENSSGRP00000097126
Mast/stem cell growth factor receptor kita-like.
      
 0.633
ENSSGRP00000026726
annotation not available
      
 0.624
LOC107558038
Vascular endothelial growth factor receptor 3-like.
      
 0.623
LOC107579348
C-C chemokine receptor type 9-like.
      
 0.623
ENSSGRP00000021026
Delta-like protein C isoform X1.
      
 0.623
LOC107584431
GATA-binding factor 2-like.
      
 0.623
ENSSGRP00000061373
GATA-binding factor 2-like.
      
 0.623
LOC107560597
Microfibril-associated glycoprotein 4-like.
      
 0.623
LOC107580185
Transcription factor EC-like isoform X1.
      
 0.623
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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