STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Supt3hTranscription initiation protein SPT3 homolog. (357 aa)    
Predicted Functional Partners:
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.996
TADA1
Transcriptional adapter 1.
    
 
 0.993
ENSSGRP00000012988
Transformation/transcription domain-associated protein-like.
    
 0.992
LOC107588503
Transcription initiation factor TFIID subunit 12-like.
    
 0.992
LOC107550511
Transcription initiation factor TFIID subunit 10-like isoform X1.
    
 0.992
LOC107566933
Transcription initiation factor TFIID subunit 12-like.
    
 0.992
ENSSGRP00000045850
SPT20 homolog, SAGA complex component.
    
 0.992
LOC107589048
Transcription factor SPT20 homolog isoform X1.
    
 0.992
LOC107591795
Transcription initiation factor TFIID subunit 10-like.
    
 0.992
ENSSGRP00000060356
SAGA complex associated factor 29.
    
 0.992
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.