STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nif3l1NIF3-like protein 1 isoform X1. (459 aa)    
Predicted Functional Partners:
aadat
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial.
  
    0.828
ENSSGRP00000065620
DTDP-D-glucose 4,6-dehydratase-like isoform X1.
  
    0.783
ENSSGRP00000012371
annotation not available
   
    0.752
ENSSGRP00000062114
GPN-loop GTPase 1.
   
    0.752
ENSSGRP00000100221
GPN-loop GTPase 1.
   
    0.752
LOC107549110
Ribonuclease H1-like isoform X1.
  
  
 0.710
LOC107601728
Ribonuclease H1-like isoform X1.
  
  
 0.710
ENSSGRP00000094644
Ribonuclease H-like.
  
  
 0.710
LOC107589327
COP9 signalosome complex subunit 2.
   
 
 0.697
ENSSGRP00000081414
Coenzyme Q3 methyltransferase.
  
  
 0.693
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.