STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000054091Contactin-4-like. (1032 aa)    
Predicted Functional Partners:
ENSSGRP00000002882
annotation not available
    
 0.663
ptprg
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.663
ENSSGRP00000053877
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.663
ENSSGRP00000047316
Carbonic anhydrase XVI b.
    
 0.653
LOC107580043
Neuronal cell adhesion molecule-like isoform X1.
    
0.571
ENSSGRP00000020222
Neural cell adhesion molecule L1-like isoform X1.
    
0.571
ENSSGRP00000022723
Neural cell adhesion molecule L1.1-like.
    
0.571
ENSSGRP00000032619
annotation not available
    
0.571
LOC107560901
Neurofascin-like.
    
0.571
LOC107569852
Neural cell adhesion molecule L1-like protein isoform X1.
    
0.571
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.