STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107601132Transmembrane 9 superfamily member 2-like isoform X1. (652 aa)    
Predicted Functional Partners:
LOC107550417
Transmembrane emp24 domain-containing protein 10-like.
   
  
 0.803
LOC107593259
Transmembrane protein Tmp21-like.
   
  
 0.803
ENSSGRP00000021463
Protein FAM234B-like.
      
 0.618
cabcoco1
Uncharacterized protein C10orf107 homolog.
   
    0.554
ENSSGRP00000066763
Ciliary associated calcium binding coiled-coil 1.
   
    0.554
LOC107560407
Serine palmitoyltransferase 1-like.
   
  
 0.519
ENSSGRP00000040954
Serine palmitoyltransferase 1-like.
   
  
 0.519
LOC107598476
Vacuolar protein sorting-associated protein 54-like isoform X1.
      
 0.509
ENSSGRP00000082258
Vacuolar protein sorting-associated protein 54-like.
      
 0.509
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 
 0.416
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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