STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107556021Prosaposin-like isoform X1. (318 aa)    
Predicted Functional Partners:
ENSSGRP00000013250
annotation not available
   
 0.723
ENSSGRP00000023970
Glucosylceramidase-like.
   
 0.723
LOC107598433
Glucosylceramidase-like.
   
 0.723
ENSSGRP00000047052
Glucosylceramidase-like.
   
 0.723
LOC107594177
Transmembrane protein 130-like.
   
 0.723
LOC107560205
Galactocerebrosidase.
    
 
 0.715
ENSSGRP00000073858
Galactocerebrosidase-like.
    
 
 0.715
LOC107588298
Galactocerebrosidase-like.
    
 
 0.715
ENSSGRP00000109356
Galactosylceramidase a.
    
 
 0.715
ENSSGRP00000007571
annotation not available
     
 0.682
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.