STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ciao2aMIP18 family protein FAM96A. (157 aa)    
Predicted Functional Partners:
ENSSGRP00000024629
annotation not available
    
 0.995
ciao1
Probable cytosolic iron-sulfur protein assembly protein CIAO1 isoform X1.
    
 0.995
ENSSGRP00000005936
annotation not available
    
 0.981
ENSSGRP00000015089
MMS19 nucleotide excision repair protein homolog.
    
 0.981
ENSSGRP00000077727
Excision repair cross-complementation group 2.
    
 0.869
LOC107601732
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.869
ENSSGRP00000028955
Nuclear prelamin A recognition factor.
    
 0.835
LOC107565794
Nuclear prelamin A recognition factor.
    
 0.835
ENSSGRP00000059121
LOW QUALITY PROTEIN: cytosolic Fe-S cluster assembly factor narfl-like.
    
 0.835
ciao3
Cytosolic Fe-S cluster assembly factor NARFL isoform X1.
    
 0.835
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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