STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107549189COMM domain-containing protein 3-like. (192 aa)    
Predicted Functional Partners:
commd6
COMM domain-containing protein 6.
   
 0.977
commd2
COMM domain-containing protein 2 isoform X1.
    
 0.976
commd10
COMM domain-containing protein 10.
   
 0.970
LOC107549974
Coiled-coil domain-containing protein 22.
    
 0.945
LOC107549645
Coiled-coil domain-containing protein 22-like isoform X1.
    
 0.945
LOC107598557
COMM domain-containing protein 1-like.
    
 0.934
LOC107594359
COMM domain-containing protein 1-like.
    
 0.934
commd9
COMM domain-containing protein 9.
    
 0.924
ENSSGRP00000057128
COMM domain containing 9.
    
 0.924
LOC107571369
COMM domain-containing protein 5-like.
    
 0.921
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.